Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922953.1_cds_XP_016471689.1_63997
CDS Infomation

[gene=LOC107793768] [db_xref=GeneID:107793768] [protein=splicing factor 1] [protein_id=XP_016471689.1] [location=join(5211..5495,6309..6434,6514..6553,6643..6725,7324..7392,7503..7556,7797..7925,8079..9704)] [gbkey=CDS]
Sequence

ATGAGCGCCAAACTTGAGCAGGCATCTAGCCGCATCCAGACGGCTGCTTCATCTGCAACA
TCATTGAGCAGCCCAAAGATCTCTATGTTTGCCAATAAAACCGGATTTGTGATACCAAAA
AACAAGTTAGCAGGTTCATTGGTTCCGGTATATCGAGGAGGGAAAAAAGGAGGTAGTGAT
TCTGTTAATGAAGAGAGCAGTAAACAGGTGCAAAGGAAAACCAAGTGGGGCCCTGATCTT
ACGCAAGATACCACTGTCAGAAAAGCAAGAGCCTTGGCATATCAGAGTCGGGTGGATCAA
ATAACACAGCTACTGAGTTCTAGGACTTTGGAGGGTGAAGGCAGCAAGGACGCACTGTCA
GCCTCCCCTGCTAAAGATCATGAGTCTTCGGACCATCAACCTAATGATGAGAGCGTGAGT
TCACTGGAACTTGAAAGACAGGAAGCCATTGGGGAGATTCTAAAACTGAATCCCAGCTAT
AAGCCACCTGCTGGTTATAAGCCTGTACCCAAGGAGGCAAAGATCCCATTACCTATCAAA
GAACATCCTGGGTACAATTTTATAGGTTTGATTTTTGGCCCTGCTCATAAGCAACTGGAA
AAGGAAACTGGAGCTCAAGTAAAGGTTTATGGTACCAAAGCAGATACTGGAGAGAAGATA
GAAGCTACTTCTGGTGAAAATGATTCTGGTGCTTATGAGGAAATGTATGTCCAAGTATCA
GCTGAGACATATGAAAAGGTTGACGCTGCAGTTGCTTTAATTGAACTTCTGGTTACCCCA
GCTTCAGTTACTCCAGCGTCGACTACCGCAAAATCGTCAGGTGATGGAGAAACTATTTCC
GGCGAAGCAACACCAGGCCCAACGACTCCTCCTGTAGTAAATCAAGGGGTGGCTCAACCA
GTTGTGGGGACGCAACCTGCTCAATTACAAGGTCATTTTCAGCCATATCAAGGACAATGG
TTTCCTGGACCTACATCTCAGAATACAGTAACTCCATTTCCAGGACCCATTAACTCCTGG
AGTTCTTCAGCATCCCTGGTCAGCAACCCTCACCAAGTATCTCCATCTCCTACCAACCTG
TCAAATGCACCCTCACCCTTTGGCCCACCACAGGGTATGGCAGATGGATTTGGTTCAGTT
CCGCGAAACCCTTTTGTTAACTCTAGCCCACAGGCACCACCACTAATGCGGCAGCCTTTC
ATGCCTTCCACTCATCTCGGACAAATTGGTGGACCTAGACATCTGATACCATCTTTAGGG
TCTACACCACCTCAATCCAATATGACTCCACCTCAATTTTCTCAGAGCCAACCAAATCCA
ACAGGGTTTCCACAGGGGTTGAGATCTGTTATGTCTTCAATGCCTCAGTCTATCCCTCCT
ATGGCATACCCAGACCGACCATTGACCCCAGGCGGGAGCTCTCCTGGATGGTCACAGTCA
CCATGGAACACCCAGACGGGTCAAGGAAGTCATCATCTTTCTTCACGACCTATGGGCATC
TCTACCGCTCCACATTTAGATGTTTCACATGGCCATAATTTAGCACCCCAGTCATCTGGA
CCAGCTCCATCTACGAATTCCGTTTTTCAATCTCAAACACGTATGCCGCCTCCAATGCAT
CCATCTTCAGGATCTAACCCTGCTCATTTCTTGAACCACCCTGTATCTAGCGGACAACAA
GTCATGCATAGTCTCTCACCTAATCCAAATCATGGAAGTTCTCTTAATATTAATTCCATG
AGACCTCCTTCCTCTGGAGCTCCAAAACCACTGCAGGCCAGTAGTGATTTTACATTCCAG
CCTCACCATCCACAGAATCCAGCATCTCAAGTTGTTTCCAGGCCAGCTGGGCAATTTGGT
TCTCAGGAATTTTCACCTCCAAACCAGATGATGCGCCCTTATCTACGACCAGCAATAGAC
AGTACAAATCCCCCACCTGTTAATCAAGGATTCCCAAGACCTCTATTAAGCAATCAGATT
AATCAGCCAGGACCACACATGTCACCTGATTTCGCCCGAGGACCTGCTGGCCCTCTCCCT
CAATTTAGGCACCCGGCATTTTCAAATCAGGGTATAGCTTCACCTACCGGCCCTCAAATG
CAACCTCTGAACTTTAGGCCAGCTCCGAATCCTGTAGGTTCTTTCTCTCCTAGAGTAGGA
AACCCGATGCCTCTTCAGCAAAATAATCCAACTGCCATGCTTCGACCACAAAATTTTGAG
GCTCCCAACAATGTCTTCTTTCGACACAGTAGGCCTGTCTCCAGCTCCTCTGGAGCACAT
CAAATATATGACCCCTTCTCACCCACTTCTGTCCCTCGGCGTCCTCATCCCGGTGGTAAT
CCGGCAATGGTAGAAAAACAAGAGAGTGATCCTGAATATGAAGACTTGATGGCCTCTGTT
GGAGTTAAATGA

Peptide Sequence

PEP ID

XP_016471689.1
PEP Infomation

PREDICTED: splicing factor 1 [Nicotiana tabacum]
Sequence

MSAKLEQASSRIQTAASSATSLSSPKISMFANKTGFVIPKNKLAGSLVPVYRGGKKGGSD
SVNEESSKQVQRKTKWGPDLTQDTTVRKARALAYQSRVDQITQLLSSRTLEGEGSKDALS
ASPAKDHESSDHQPNDESVSSLELERQEAIGEILKLNPSYKPPAGYKPVPKEAKIPLPIK
EHPGYNFIGLIFGPAHKQLEKETGAQVKVYGTKADTGEKIEATSGENDSGAYEEMYVQVS
AETYEKVDAAVALIELLVTPASVTPASTTAKSSGDGETISGEATPGPTTPPVVNQGVAQP
VVGTQPAQLQGHFQPYQGQWFPGPTSQNTVTPFPGPINSWSSSASLVSNPHQVSPSPTNL
SNAPSPFGPPQGMADGFGSVPRNPFVNSSPQAPPLMRQPFMPSTHLGQIGGPRHLIPSLG
STPPQSNMTPPQFSQSQPNPTGFPQGLRSVMSSMPQSIPPMAYPDRPLTPGGSSPGWSQS
PWNTQTGQGSHHLSSRPMGISTAPHLDVSHGHNLAPQSSGPAPSTNSVFQSQTRMPPPMH
PSSGSNPAHFLNHPVSSGQQVMHSLSPNPNHGSSLNINSMRPPSSGAPKPLQASSDFTFQ
PHHPQNPASQVVSRPAGQFGSQEFSPPNQMMRPYLRPAIDSTNPPPVNQGFPRPLLSNQI
NQPGPHMSPDFARGPAGPLPQFRHPAFSNQGIASPTGPQMQPLNFRPAPNPVGSFSPRVG
NPMPLQQNNPTAMLRPQNFEAPNNVFFRHSRPVSSSSGAHQIYDPFSPTSVPRRPHPGGN
PAMVEKQESDPEYEDLMASVGVK

Transcript Sequence

Gene sequence data has not been registered.